JANE: will find the best matching journals, authors or articles for you.

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Have you recently written a paper, but you’re not sure to which journal you should submit it?

http://www.biosemantics.org/jane/

from:

http://www.protocol-online.org/forums/topic/34948-list-of-scientific-journals-by-topic/

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Protein sequence motifs, active or functional sites, and functional annotations

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http://www.hsls.pitt.edu/obrc/index.php?page=sequences_motifs_functional_sites_annotations

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