http://www.arb-home.de  (rRNA sequence data phylogenetic treeing for rRNA and protein)

https://www.arb-silva.de    (A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data.)


16s sequencing:

Primers for microbial detection by sequencing.

Primer Sequence
For bacteria 10F 5′-GTTTGATCCTGGCTCA
800R 5′-TACCAGGGTATCTAATCC
For fungi ITS1F 5′-GTAACAAGGT(T/C)TCCGT
ITS1R 5′-CGTTCTTCATCGATG
For full-length sequencing(only for bacteria
27F 5′-AGAGTTTGATCCTGGCTCAG
1492R 5′-GGCTACCTTGTTACGACTT

From:

http://www.bexnet.co.jp/english/product/trust/gene-analysis/microbial.html

 

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